medconb-client is a Python client for the MedConB API.
Project description
MedConB Client
This library provides a Python interface to the MedConB API. With this you can easily retrieve whole codelists from MedConB.
Installation
You can install (and update) it into your python environment by running:
pip install --force-reinstall -U medconb-client
Usage
To use it, you need to create a client:
from medconb_client import Client
endpoint = "https://api.medconb.example.com/graphql/"
token = get_token()
client = Client(endpoint, token)
with that client you can now interact with the API.
Get a codelist by name
codelist = client.get_codelist_by_name(
codelist_name="Coronary Artery Disease",
codelist_collection_name="Pacific AF [Sample]",
)
codelist = client.get_codelist_by_name(
codelist_name="Coronary Artery Disease",
phenotype_collection_name="[Sample] PACIFIC AF ECA",
phenotype_name="Coronary Artery Disease",
)
Get a codelist by id
codelist = client.get_codelist(
codelist_id="9c4ad312-3008-4d95-9b16-6f9b21ec1ad9"
)
Retrieve collections in your workspace
workspace_info = client.get_workspace()
collection_info = next(
collection
for collection in workspace_info.collections
if collection.itemType == "Codelist"
)
codelist = client.get_codelist(collection_info.items[0].id)
For more information, also see our Examples Page.
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