BESST

Scaffolder for genomic assemblies.

These details have not been verified by PyPI

Project links

Homepage

Development Status
- 4 - Beta
Environment
- Console
Intended Audience
- Science/Research
Natural Language
- English
Operating System
- POSIX :: Linux
Programming Language
- Python
Topic
- Scientific/Engineering :: Bio-Informatics

Project description

BESST is a package for scaffolding genomic assemblies. It contains several modules for e.g. building a “contig graph” from available information, obtaining scaffolds from this graph, and accurate gap size information (based on GapEst http://www.ncbi.nlm.nih.gov/pubmed/22923455). For installation, see docs/INSTALL.txt.

Project details

These details have not been verified by PyPI

Project links

Homepage

Development Status
- 4 - Beta
Environment
- Console
Intended Audience
- Science/Research
Natural Language
- English
Operating System
- POSIX :: Linux
Programming Language
- Python
Topic
- Scientific/Engineering :: Bio-Informatics

Release history Release notifications | RSS feed

2.2.8

Jan 5, 2018

2.2.7

Sep 2, 2017

2.2.6

Feb 20, 2017

2.2.5

Jul 12, 2016

2.2.4

May 2, 2016

2.2.3

Apr 28, 2016

2.2.2

Apr 26, 2016

2.2.1

Apr 26, 2016

2.1.0

Nov 12, 2015

1.3.8

May 26, 2015

1.3.7

Jan 28, 2015

1.3.6

Jan 28, 2015

1.3.4

Dec 3, 2014

1.3.3

Nov 21, 2014

1.3.2

Nov 20, 2014

1.3.1

Nov 7, 2014

1.3.0

Nov 3, 2014

1.2.3

Sep 2, 2014

1.2.2

Sep 2, 2014

1.2

Aug 31, 2014

1.1.3

Aug 30, 2014

1.1.2

Jul 18, 2014

1.1.1

Jul 6, 2014

1.1

Jul 5, 2014

1.0.4.4

Jan 20, 2014

1.0.4.3

Jan 9, 2014

1.0.4.2

Aug 23, 2013

1.0.4.1

Aug 21, 2013

1.0.3.2

Aug 15, 2013

1.0.3.1

Aug 14, 2013

1.0.3

Aug 13, 2013

1.0.2

Aug 5, 2013

1.0.1

Aug 2, 2013

1.0

Mar 10, 2013

This version

1.0.4.

Aug 17, 2013

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