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CellProfiler is a free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically.

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This codebase contains the code to build the cellprofiler package. It contains modules that implement the GUI interface, the CLI interface, and others that are non-essential to the functioning of the CellProfiler software. The subpackages are necessary dependencies for the functioning of cellprofiler.

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