A toolkit for extracting chemical information from the scientific literature.
Project description
ChemDataExtractor is a toolkit for extracting chemical information from the scientific literature.
Features
HTML, XML and PDF document readers
Chemistry-aware natural language processing pipeline
Chemical named entity recognition
Rule-based parsing grammars for property and spectra extraction
Table parser for extracting tabulated data
Document processing to resolve data interdependencies
Installation
To install ChemDataExtractor, simply run:
pip install chemdataextractor
Or if you are an Anaconda user, run:
conda install -c chemdataextractor chemdataextractor
Alternatively, try one of the other installation options.
Documentation
Full documentation is available at http://chemdataextractor.org/docs
License
ChemDataExtractor is licensed under the MIT license, a permissive, business-friendly license for open source software.
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