Imputes cryptic phenotypes analyzed in Blair et al. into arbitrary clinical datasets.
Project description
CrypticPhenoImpute
This software imputes the cryptic phenotypes inferred in Blair et al. 2020 into arbitrary ICD10-CM/ICD10-UKBB datasets. It is for replication purposes only, and it will not perform de novo model inference. Note, model files are not distributed with the package and must be downloaded on the fly from GitHub. Therefore, imputation may take several minutes as files are downloaded prior to utilization.
Installation
pip install CrypticPhenoImpute
Use
This software is intended to be used from the command line. Please type 'python -m CrypticPhenoImpute -h' into the command line following installation for instructions.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
File details
Details for the file CrypticPhenoImpute-0.1.1.tar.gz.
File metadata
- Download URL: CrypticPhenoImpute-0.1.1.tar.gz
- Upload date:
- Size: 130.3 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.2.0 pkginfo/1.7.0 requests/2.25.1 setuptools/52.0.0.post20210125 requests-toolbelt/0.9.1 tqdm/4.56.0 CPython/3.7.10
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | f7f8317d1150fe899f5e601b02bf403eda064ed2d7e2b440e2c050316080b72d |
|
| MD5 | a652a834ec5fef89a7255a9e22589a59 |
|
| BLAKE2b-256 | 6bc94930b9764eff85ca9a935e7f998602f052283fac40f1b517c8fc42ab896f |
