DLICV 1.0.1

DLICV - Deep Learning Intra Cranial Volume.

DLICV - Deep Learning Intra Cranial Volume

Overview

DLICV uses a trained nnUNet model to compute the intracranial volume from structural MRI scans in the nifti image format, oriented in LPS orientation.

Installation

As a python package

pip install DLICV

Directly from this repository

git clone https://github.com/CBICA/DLICV
cd DLICV
pip install -e .

Installing PyTorch

Depending on your system configuration and supported CUDA version, you may need to follow the PyTorch Installation Instructions.

Usage

A pre-trained nnUNet model can be found at our hugging face account. Feel free to use it under the package's licence

DLICV -i "input_folder" -o "output_folder" -device cpu

Contact

For more information, please contact CBICA Software.

For developers

Contributions are welcome! Please refer to our CONTRIBUTING.md for more information on how to report bugs, suggest enhancements, and contribute code. Please make sure to write tests for new code and run them before submitting a pull request.