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Ensemble Builder

Project Description

EnsembleBuilder uses compound activity data to train structure based ensembles to prospectively classify active and inactive compounds.


  • Works with Python 2.6, 2.7, 3.3, 3.4


Installation prerequisites

  • NumPy:
  • SciPy:

Install EnsembleBuilder with pip

pip install EB

Install EnsembleBuilder by cloning the GitHub repo

git clone
cd EB
make install


To run, type ensemblebuilder on the command line

usage:        ensemblebuilder <mode> <args>

              ensemblebuilder <mode> to show help for that mode.

  exhaustive     Determine the best performer by considering all possible ensembles, O(2^N).
  fastheuristic  Determine the best ensemble using a O(N) heuristic.
  slowheuristic  Determine the best ensemble using an O(N^2) heuristic.
  postanalysis   Plot and analyze the performance of one or more ensembles.
  splitter       Split csv input into training and test sets.


0.1.0 (ls)

  • First release on PyPI.
Release History

Release History

This version
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File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
EB-0.1.5-py2.py3-none-any.whl (40.2 kB) Copy SHA256 Checksum SHA256 2.7 Wheel Nov 19, 2015
EB-0.1.5.tar.gz (35.3 kB) Copy SHA256 Checksum SHA256 Source Nov 19, 2015

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