Ensemble Builder
Project description
===============================
EB
===============================
.. image:: https://img.shields.io/travis/rvswift/EB.svg
:target: https://travis-ci.org/rvswift/EB
.. image:: https://img.shields.io/pypi/v/EB.svg
:target: https://pypi.python.org/pypi/EB
EnsembleBuilder uses compound activity data to train structure based ensembles to prospectively classify active and
inactive compounds.
* Free software: BSD license
* Documentation: https://EB.readthedocs.org.
Features
--------
* Works with Python 2.6, 2.7, 3.3, 3.4
Installation
------------
Installation prerequisites
* NumPy: www.numpy.org
* SciPy: www.scipy.org
Install EnsembleBuilder with pip
.. code:: bash
pip install EB
Install EnsembleBuilder by cloning the GitHub repo
.. code:: bash
git clone https://github.com/rvswift/EB
cd EB
make install
Usage
-----
To run, type ensemblebuilder on the command line
.. code:: bash
usage: ensemblebuilder <mode> <args>
ensemblebuilder <mode> to show help for that mode.
modes:
exhaustive Determine the best performer by considering all possible ensembles, O(2^N).
fastheuristic Determine the best ensemble using a O(N) heuristic.
slowheuristic Determine the best ensemble using an O(N^2) heuristic.
postanalysis Plot and analyze the performance of one or more ensembles.
splitter Split csv input into training and test sets.
History
-------
0.1.0 (ls)
---------------------
* First release on PyPI.
EB
===============================
.. image:: https://img.shields.io/travis/rvswift/EB.svg
:target: https://travis-ci.org/rvswift/EB
.. image:: https://img.shields.io/pypi/v/EB.svg
:target: https://pypi.python.org/pypi/EB
EnsembleBuilder uses compound activity data to train structure based ensembles to prospectively classify active and
inactive compounds.
* Free software: BSD license
* Documentation: https://EB.readthedocs.org.
Features
--------
* Works with Python 2.6, 2.7, 3.3, 3.4
Installation
------------
Installation prerequisites
* NumPy: www.numpy.org
* SciPy: www.scipy.org
Install EnsembleBuilder with pip
.. code:: bash
pip install EB
Install EnsembleBuilder by cloning the GitHub repo
.. code:: bash
git clone https://github.com/rvswift/EB
cd EB
make install
Usage
-----
To run, type ensemblebuilder on the command line
.. code:: bash
usage: ensemblebuilder <mode> <args>
ensemblebuilder <mode> to show help for that mode.
modes:
exhaustive Determine the best performer by considering all possible ensembles, O(2^N).
fastheuristic Determine the best ensemble using a O(N) heuristic.
slowheuristic Determine the best ensemble using an O(N^2) heuristic.
postanalysis Plot and analyze the performance of one or more ensembles.
splitter Split csv input into training and test sets.
History
-------
0.1.0 (ls)
---------------------
* First release on PyPI.
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
EB-0.1.2.tar.gz
(35.3 kB
view hashes)
Built Distribution
EB-0.1.2-py2.py3-none-any.whl
(40.4 kB
view hashes)