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Convenient dowloader of raw files from ENA

Project description

ENA_tool

Convenient dowloader of raw files for ENA.

  • Fetches all samples info and metadata from xml files at ENA browser for a project by project id (accession).
  • Stores this information to .csv and .html files.
  • Allows to download .fastq files using enaDataGet

The examples of usage this tool and the outputs you can find in examples folder.

To use, please install:

  • EnaTool: pip install ENA_tool
  • enaDataGet: follow the instructions

Before usage, please, make sure, that enaDataGet is installed properly and that command like enaDataGet -f fastq -a ACCESSION works fine.

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ENATool-0.0.0.tar.gz (7.0 kB view hashes)

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