Skip to main content

Create HyRes peptide PDB files with specified geometry

Project description

HyresBuilder: A simple package for building HyRes peptide model.

This package is forked from PeptideBuilder and we do some modifications for HyRes.
Thanks for the contribution of PeptideBuilder.
Shanlong Li

Installation:

pip install HyresBuilder

Basic usage:

This package builds HyRes peptide structure from sequence. Please see the examples for details.
To obtain psf file and further run simulation on OpenMM, please follow these instructions.

[!NOTE] After obtaining the pdb files, the initial structures need to be relaxed to get more reasonable state.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

HyresBuilder-2.3.2.tar.gz (16.9 kB view details)

Uploaded Source

Built Distribution

HyresBuilder-2.3.2-py3-none-any.whl (15.5 kB view details)

Uploaded Python 3

File details

Details for the file HyresBuilder-2.3.2.tar.gz.

File metadata

  • Download URL: HyresBuilder-2.3.2.tar.gz
  • Upload date:
  • Size: 16.9 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/5.0.0 CPython/3.12.2

File hashes

Hashes for HyresBuilder-2.3.2.tar.gz
Algorithm Hash digest
SHA256 2224698598de1e52865fb88c163af5efa9436e139bfa19e64cd24dea8d35f92f
MD5 ac809635ef618981c468b43fb34749a8
BLAKE2b-256 75549cfa8ed242c6ca4bd75c1d69b3df89dd0fc481dfe16a76a314a28d7328fc

See more details on using hashes here.

File details

Details for the file HyresBuilder-2.3.2-py3-none-any.whl.

File metadata

  • Download URL: HyresBuilder-2.3.2-py3-none-any.whl
  • Upload date:
  • Size: 15.5 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? Yes
  • Uploaded via: twine/5.0.0 CPython/3.12.2

File hashes

Hashes for HyresBuilder-2.3.2-py3-none-any.whl
Algorithm Hash digest
SHA256 1c5b826e8f1878d2b9662d43e2497b4fc5b00239dd9e7312a37d09cb40765b2b
MD5 59ea3d7496ce3b7082ad5187a462b08c
BLAKE2b-256 a370f5aefedfee51c898fa9048d022c4f55597548c904cbe0568db127d8ad028

See more details on using hashes here.

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page