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integrative framework for measurements of isotope labeling

Project description

IsoSolve is a Python module realizing an integrative framework for isotope labeling measurements. It can provide both symbolic and numeric solutions for integrating and consolidating heterogeneous measurements, e.g. NMR and MS measuring ¹³C labeling, to cite the most wide spread ones. This integrative framework helps to

  1. clarify and improve the coverage of the isotopic space;

  2. evaluate the complementarity and redundancy of different techniques;

  3. consolidate isotopic datasets;

  4. design experiments, and

  5. guide future analytical developments.

This framework can be applied to any labeled element, isotopic tracer, metabolite, and analytical platform.

IsoSolve is available as a Python library with a command line interface. It is one of the routine tools that we use at the MetaSys team and MetaToul platform in isotopic studies of metabolic systems.

A paper on this subject is under preparation.

If you have an idea on how we could improve IsoSolve please submit a new issue to our GitHub issue tracker.

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