Distribution of LaueTools Package from gitlab.esrf.fr repository for pip
Project description
Welcome to LaueTools's DOCUMENTATION!
Last revision (Sept 2022)
LaueTools information on BM32 beamline website:
https://www.esrf.fr/UsersAndScience/Experiments/CRG/BM32/Microdiffraction
1- Download LaueTools code
-
the very last version of the code running with python3 is now on github (you are also welcome to fork this project):
-
last (or older releases) with repository on pypi
https://pypi.org/project/LaueTools/
if pip is installed:
.. code-block:: python
pip install lauetools
-
Former LaueTools package written for python 2.7 only (up to June 2019) is no longer maintained and can be found on sourceforge:
But it is highly recommended to use python 3 to take benefit from all capabilities
2a- Launch Graphical User Interfaces of LaueTools
- start Lauetools GUIs from command line :
Normally, in a command window (if environment variables are well set) 3 main GUIs can be launched:
> lauetools for the main GUI
> peaksearch for batch Laue pattern peak search processing
> indexrefine for batch Laue pattern indexing and unit cell (strain) refinement
> buildsummary to compile all results from indexrefine analysis
> plotmap to plot 2D map of structural quantities from file built previously
> plotmeshgui to plot 2D map from counters values in (spec) logfile
To deal with relative import, the package name ‘LaueTools’ must be specified to the python interpreter with -m option as following
if LaueTools is a current subfolder:
- python -m LaueTools.LaueToolsGUI
- python -m LaueTools.GUI.LaueSimulatorGUI
- python -m LaueTools.GUI.PeaksearchGUI
The two last GUIs (LaueSimulatorGUI, PeaksearchGUI) can be accessed by the first main one, LaueToolsGUI
There are additional basic GUIs for batch processing located in FileSeries folder:
- python -m LaueTools.FileSeries.Peak_Search
- python -m LaueTools.FileSeries.Index_Refine
- python -m LaueTools.FileSeries.Build_summary
- python -m LaueTools.FileSeries.Plot_Maps2
-
within interactive python (say, ipython -i), GUI can be started thanks to a start() function:
-
In [1] : import LaueTools.LaueToolsGUI as LTGUI
-
In [2] : LTGUI.start()
-
.. note:: in the LaueTools folder :
- neither > python LaueToolsGUI
- nor in >ipython -i : > run LaueToolsGUI will work…
2b- Use LaueTools module as a library
With pip installation, LaueTools package will be included to python packages. Therefore any module will be callable as the following:
-In [1] : import LaueTools.readmccd as rmccd
-In [2] : rmccd.readCCDimage(‘myimage.tif’)
In jupyter-notebook, it is also simple in the same manner:
.. image:: /images/notebook0.jpg
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