MGSurvE
Project description
MGSurvE: Mosquito Gene SurveillancE
MGSurvE is a project oriented towards the optimization of traps' placement in complex heterogeneous landscapes in an effort to minimize the time to detection of genetic variants of interest.
Under Construction :construction: Please check back in a couple of weeks!
To install the package's latest stable version, run:
pip install MGSurvE
conda install -c conda-forge cartopy
Please have a look at the documentation for more info and our pypi package for installation and versions.
Features and Development
- Different point-types
- Random point-process landscape generators
- Customizable movement kernels
- Customizable trap attractiveness kernels
- Integrated plotting routines
- GA Optimization routines
- Directed network plotting routines
- Demos and Examples
- Immovable traps
- Different attractiveness levels at specific point-type transitions
- Different movement kernels for male and female mosquitos
- Different trap attractiveness levels for male and female mosquitos
- Thorough timing benchmarks
- Support for xy coordinate systems
- Integrated Map-plotting routines
- Repellency effects
Authors and Funders
- Lead and Dev: Héctor M. Sánchez C.
- Active Devs: Elijah Bartolome, Lillian Weng, Ayden Salazar, Xingli Yu, Joanna Yoo
- PIs: David L. Smith, John M. Marshall
Project details
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