MiSCoTo is a Python3 tool to explore microbiomes and select minimal communities within them. It uses Answer Set Programming (ASP) to optimize community selection. Inputs: metabolic models, seeds (growth medium) and metabolic targets. Computations can be performed with a set of symbionts or a set of symbionts and a host. In the latter case, targets will be produced by the host, whereas in the former they will be produced by any member of the microbiome. More information on usage and troubleshooting on Github: https://github.com/cfrioux/miscoto
Release files for Miscoto 3.0.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| Miscoto-3.0.0.tar.gz | 20.4 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| Miscoto-3.0.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 55.4 kB
Release files / Miscoto-3.0.0.tar.gz
| Download URL | Miscoto-3.0.0.tar.gz |
|---|---|
| Size | 20.4 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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No |
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twine/3.2.0 pkginfo/1.6.0 requests/2.24.0 setuptools/47.1.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.7.9
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Release files / Miscoto-3.0.0-py3-none-any.whl
| Download URL | Miscoto-3.0.0-py3-none-any.whl |
|---|---|
| Size | 35.0 kB |
| Tags | Python 3 |
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SHA-256 checksum How to use checksums |
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No |
| Uploaded via |
twine/3.2.0 pkginfo/1.6.0 requests/2.24.0 setuptools/47.1.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.7.9
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