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microscopy data processor

Project description

NanoscoPy

An open source repo for the analysis of experimental microscopy data common in materials and surface science.

Example Usage

import nanoscopy as nano
import matplotlib.pyplot as plt

# Specify the file to be imported
filepath_sxm = '../ExampleDataFiles/STM_Au-111_Flat.sxm'

# Read the data
scan = nano.spm.io.read(filepath_sxm)[0]

# Select the forward pass of the height channel from the data
image = scan.data['Z'][0]

# Correct the data
flattened_image = nano.spm.process.basic_flatten(image)

# Show flattened image 
plt.imshow(flattened_image)

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