Predict: a Radiomics Extensive Digital Interchangable Classification Toolkit.
Project description
This is an open-source python package supporting radiomics image feature extraction.
Documentation
For more information, see the sphinx generated documentation available here (WIP).
Alternatively, you can generate the documentation by checking out the master branch and running from the root directory:
python setup.py build_sphinx
The documentation can then be viewed in a browser by opening PACKAGE_ROOT\build\sphinx\html\index.html.
Installation
PREDICT has currently been tested on Ubuntu 16.04 and 18.04, and Windows 10 using Python 3.6.6 and higher.
The package can be installed through pip :
pip install PREDICT
Alternatively, you can use the provided setup.py file:
python setup.py install
Make sure you first install the required packages:
pip install -r requirements.txt
3rd-party packages used in PREDICT:
We mainly rely on the following packages:
SimpleITK (Image loading and preprocessing)
numpy (Feature computation)
scikit-image
pandas (Storage)
PyRadiomics
pydicom
See also the requirements file.
License
This package is covered by the open source APACHE 2.0 License.
Contact
We are happy to help you with any questions: please send us a message or create an issue on Github.
Project details
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