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PyMICE - a Python® library for mice behavioural data analysis

Project description

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PyMICE is a Python® library for mice behavioural data analysis.

The library can be used for loading and analysing of data obtained from IntelliCage™ system in an intuitive way in Python programming language.

The library provides user with an object oriented application programming interface (API) and a data abstraction layer. It also comes with auxiliary tools supporting development of analysis workflows, like data validators and a tool for workflow configuration.

We ask that PyMICE resource identifier (RRID:nlx_158570) is provided in any published research making use of PyMICE.

For more details please see The project website.

Authors

  • The library

    • Jakub Kowalski

    • Szymon Łęski

  • Tutorial data

    • Alicja Puścian

Acknowledgement

JK and SŁ supported by Symfonia NCN grant: UMO-2013/08/W/NZ4/00691.

AP supported by a grant from Switzerland through the Swiss Contribution to the enlarged European Union (PSPB-210/2010 to Ewelina Knapska and Hans-Peter Lipp).

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