RSeQC 5.0.4

QC package for RNA-seq data.

Install RSeQC using pip

Check if pip is available

pip is a package manager that allows users to install and manage Python packages. It comes with Python 3.4 and later versions.

pip --version

pip 24.2 from /XXX/YYY/lib/python3.11/site-packages/pip (python 3.11)

If you see any errors, following this instructions to install pip.

(Optional) Create Virtual Environments (Note: venv is available in Python 3.3 and later. You can also use virtualenv)

$ python3 -m venv my_env (will create a directory called my_env)

$ source my_env/bin/activate

Install

$ pip install rseqc

Upgrade

$ pip install rseqc --upgrade

Uninstall

pip -y uninstall rseqc

Documentation

http://rseqc.sourceforge.net/