An interactive readmapping visualization tool
Project description
recruitploteasy
Author: Kenji Gerhardt Email: Kenji.Gerhardt@gmail.com Github: https://github.com/KGerhardt/RecruitPlotEasy
RecruitPlotEasy is a tool written in both R and Python 3 that allows for the interactive visualization of short read mapping data.
By supplying a set of genomes in FASTA format and a set of reads mapped to those genomes in tabular BLAST, SAM, or BAM format, a user can produce Recruitment Plots which display depth of coverage across the genome, percent identity to the reference genome used in mapping, and help identify mixed or sequence-discrete populations in a metagenomic sample.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for RecruitPlotEasy-2.0.1-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 1f84412c769ad7fe07dee5e21b5c604c638d1dcc6da113ba01ad587a259f3073 |
|
MD5 | 346b52070a5e734f09898d58600d9cab |
|
BLAKE2b-256 | 7af7f760e91bbc1a8bea8154e7286fb06ca381154aaf9efc31e545b58d43d103 |