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VIVO harvester

Project description



pip install VIVOHarvester


git clone
python install


  • Harvest data from Elements (Default)
vivotool -f local.yml -t harvest -d 0
  • Harvest data from Elements a day ago (Current time -1 day)
vivotool -f local.yml -t harvest -d 1
  • Import RDF data into a VIVO instance
vivotool -f local.yml -t ingest
  • Fetch user_map.csv
vivotool -f local.yml -t getuser


vivotool -f local.yml -t getuser -o yourpath/yourfilename

Database creation

  • Create require database
vivotool -f local.yml -t db

Upgrade to newer version

pip uninstall VIVOHarvester
pip install VIVOHarvester==0.1.2 (e.g.)


py.test --cov=vivotool test/
coverage report -m
coverage report

Project details

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