Skip to main content

Wendellor package mount a NCBI query, perform search, download fasta sequences and finally, run muscle and tabajara!

Project description

# Wendellor [![Build Status](https://travis-ci.org/WendelHime/Wendellor.svg?branch=master)](https://travis-ci.org/WendelHime/Wendellor) [![Coverage Status](https://coveralls.io/repos/github/WendelHime/Wendellor/badge.svg?branch=master)](https://coveralls.io/github/WendelHime/Wendellor?branch=master) [![Documentation Status](https://readthedocs.org/projects/wendellor/badge/?version=latest)](http://wendellor.readthedocs.io/en/latest/?badge=latest) [![PyPI version](https://badge.fury.io/py/Wendellor.svg)](https://badge.fury.io/py/Wendellor)<br /> Wendellor package mount a NCBI query, perform search, download fasta sequences and finally, run muscle and tabajara! You can see [documentation here](http://wendellor.readthedocs.io/en/latest/)

## Setup Install dependences: `zsh sudo apt install git python3-dev python3-pip ` ### Install You can install running pip3:

`zsh sudo pip3 install Wendellor ` Or `zsh python3 -m pip install --user Wendellor `

### Uninstall `zsh pip3 uninstall Wendellor `

## Tests You can run tests:

`zsh python3 setup.py test `

## Running

`zsh wendellor.py conf_examples/example_both_discrimination.conf `

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Filename, size & hash SHA256 hash help File type Python version Upload date
Wendellor-1.1-py2.py3-none-any.whl (30.2 kB) Copy SHA256 hash SHA256 Wheel py2.py3 May 13, 2018
Wendellor-1.1.tar.gz (12.6 kB) Copy SHA256 hash SHA256 Source None May 13, 2018

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page