acd2cwl provides: - a2c-tools, a generator of wrappers for EMBOSS tools. It uses the formal definition of the tools provided by the ACD files. - a2c-tests, a generator of functional tests for these tools. It uses the functional tests defined in the EMBOSS package itself
Install
Installing the official package from PyPi:
pip install acd2cwl
Or from source: ` git clone https://github.com/hmenager/acd2cwl.git cd acd2cwl && python setup.py install `
Run tool wrappers generator
Simple command:
a2c-tools /usr/share/EMBOSS/acd/*.acd
For more options, just type
a2c-tools –help
Run test jobs generator
Simple command:
a2c-tests /usr/share/EMBOSS/test/qatest.dat /usr/share/EMBOSS/acd/*.acd
For more options, just type
a2c-tests –help
1 maintainer
Metadata
1 maintainer
Release files for acd2cwl 0.1.6
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| acd2cwl-0.1.6.tar.gz | 5.1 kB | Without provenance | Details for acd2cwl-0.1.6.tar.gz |
Release files / acd2cwl-0.1.6.tar.gz
| Download URL | acd2cwl-0.1.6.tar.gz |
|---|---|
| Size | 5.1 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
c1e4c48a8b7d6ea0c3265e1da046d562d697efe00cdfe96c2c771ccf33c0a18f
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Security for acd2cwl 0.1.6
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