Skip to main content

Adama Library

Project description

Adamalib provides a Python library/SDK for interacting with Adama. It is designed to be used as a standalone library in the user’s local machine to develop Adama microservices.

Installation

Use pip:

pip install git+git://github.com/Arabidopsis-Information-Portal/adamalib.git

It’ll be moved to PyPI as soon as it reaches some stability.

As an alternative, see using adamalib in Docker below.

Using adamalib in Docker

This repository includes a Dockerfile and a docker-compose.yml file, which allows a zero installation version of adamalib.

The only requirement is Docker and docker-compose, most likely already installed in your system.

Then, clone this repository and execute docker-compose as follows:

$ git clone https://github.com/Arabidopsis-Information-Portal/adamalib.git
$ cd adamalib
$ docker-compose build
$ docker-compose up

(a bug in docker-compose requires doing the steps build and up separately. In the future, only up will be necessary.)

Navigate to http://localhost:8888 and access the Jupyter notebook with password adamalib. The notebook Example.ipynb contains a full example of use. The notebook Provenance.ipynb contains an example of accessing provenance information from Python.

Note: If you are running on a Mac with boot2docker, substitute localhost by the output of:

$ boot2docker ip

License

Free software: MIT license

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distributions

No source distribution files available for this release.See tutorial on generating distribution archives.

Built Distribution

adamalib-0.1.0-py2.py3-none-any.whl (8.2 kB view hashes)

Uploaded Python 2 Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page