AiiDA plugin adding a sshonly transport option, using only SSH to transfer files, avoiding SFTP, in case it's blocked or non functional on a remote system
Project description
aiida-sshonly
AiiDA plugin adding a sshonly transport option, using only SSH to transfer files, avoiding SFTP, in case it's blocked or non functional on a remote system
Features
Provides a new 'sshonly' transport option when configuring a computer in AiiDA. Uses SSH and shell commands to emulate SFTP commands used in AiiDA.
Known limitation : only works with text files as of 0.1.0
Installation
pip install aiida-sshonly
reentry scan
verdi plugin list aiida.transports # should now show your calclulation plugins
Usage
Here goes a complete example of how to submit a test calculation using this plugin.
A quick demo of how to submit a calculation:
verdi daemon start # make sure the daemon is running
cd examples
./example_01.py # run test calculation
verdi process list -a # check record of calculation
The plugin also includes verdi commands to inspect its data types:
verdi data sshonly list
verdi data sshonly export <PK>
Development
git clone https://github.com/adegomme/aiida-sshonly .
cd aiida-sshonly
pip install -e .[pre-commit,testing] # install extra dependencies
pre-commit install # install pre-commit hooks
pytest -v # discover and run all tests
See the developer guide for more information.
License
MIT
Project details
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