Compute a consensus dataseries with FAMSA algorithm.
Project description
Albion Similog
This project is dedicated to the generation of possible edges within the Albion framework, through the way of FAMSA algorithm.
albion_similog
works with Python3.8.
Installation
Dependencies
This package works with a few dependencies from the biology ecosystem, like biopython
or
scikit-bio
. They are installable easily through pip
.
There is a notable exception with FAMSA
, that should be patched for specific Albion purpose, and
compiled. Everything is managed through the Makefile
.
Debian/Ubuntu
$ virtualenv .venv
$ source .venv/bin/activate
(.venv) $ make install
Windows
TODO
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
albion_similog-0.3.2.tar.gz
(10.6 kB
view hashes)
Built Distribution
Close
Hashes for albion_similog-0.3.2-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | ba0dd3dd20244b384982b7983e0abbe527c939eb6d04461639d7403775d61973 |
|
MD5 | 876e7ba66c929bdb5e80a687da4e5924 |
|
BLAKE2b-256 | 070e11f702e370bddefb340673e73be61b3a4f7a1713de5130de0567e340be9d |