alphabetsoup -- fixes problems in protein FASTA files.
Project description
al·pha·bet soup /ˈalfəˌbet so͞op/Submit noun INFORMAL incomprehensible or confusing language, typically containing many abbreviations or symbols.
alphabetsoup fixes problems with protein FASTA files: +————————–+————————+ | Problem | Fix | +————————–+————————+ | Unknown character | Replaces with ‘X’ | +————————–+————————+ | Stop/ambigous at ends | Trims | +————————–+————————+ | Stop/ambiguous in middle | Optionally fragments | +————————–+————————+ | Too short | Deletes record | +————————–+————————+
Latest Release |
||
GitHub |
||
License |
||
Documentation |
||
Travis Build |
||
Coverage |
||
Pythonicity |
||
Code Grade |
||
Dependencies |
||
Issues |
||
Kanban |
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
File details
Details for the file alphabetsoup-0.5.1.tar.gz.
File metadata
- Download URL: alphabetsoup-0.5.1.tar.gz
- Upload date:
- Size: 57.6 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: Python-urllib/3.6
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
cd16f5b9cde464751f2b26bcc08bbe7c94f4356ef8a79f06fecedb08c17432b2
|
|
| MD5 |
64ebf979318c71455041d16bf288a0ee
|
|
| BLAKE2b-256 |
0f6e21c217c8d93d7322aa0b4046c0bde45d08bd2f370e365b1e39553c32fef6
|
