alphareader 0.0.1

A reader for large files with custom delimiters and encodings

AlphaReader

After several attempts to try the csv package or pandas for reading large files with custome delimiters, I ended up writting a little program that does the job without complaints.

AlphaReader is a high performant, pure python, 15-line of code library, that reads chunks of bytes from your files, and retrieve line by line, the content of it.

The inspiration of this library came by having to extract data from a MS-SQL Server database, and having to deal with the CP1252 encoding. By default AlphaReader takes this encoding as it was useful in our use case.

It works also with HDFS through the pyarrow library. But is not a depedency.

CSVs

# !cat file.csv
# 1,John,Doe,2010
# 2,Mary,Smith,2011
# 3,Peter,Jones,2012

> reader = AlphaReader(open('file.csv', 'rb'), encoding='cp1252', terminator=10, delimiter=44)
> next(reader)
> ['1','John','Doe','2010']

TSVs

# !cat file.tsv
# 1    John    Doe    2010
# 2    Mary    Smith  2011
# 3    Peter   Jones  2012

> reader = AlphaReader(open('file.tsv', 'rb'), encoding='cp1252', terminator=10, delimiter=9)
> next(reader)
> ['1','John','Doe','2010']

XSVs

# !cat file.tsv
# 1¦John¦Doe¦2010
# 2¦Mary¦Smith¦2011
# 3¦Peter¦Jones¦2012

> ord('¦')
> 166
> chr(166)
> '¦'
> reader = AlphaReader(open('file.tsv', 'rb'), encoding='cp1252', terminator=10, delimiter=166)
> next(reader)
> ['1','John','Doe','2010']

HDFS

# !hdfs dfs -cat /raw/tsv/file.tsv
# 1    John    Doe    2010
# 2    Mary    Smith  2011
# 3    Peter   Jones  2012

> import pyarrow as pa
> fs = pa.hdfs.connect()
> reader = AlphaReader(fs.open('/raw/tsv/file.tsv', 'rb'), encoding='cp1252', terminator=10, delimiter=9)
> next(reader)
> ['1','John','Doe','2010']

Transformations

# !cat file.csv
# 1,2,3
# 10,20,30
# 100,200,300

> fn = lambda x: x+1
> reader = AlphaReader(open('/raw/tsv/file.tsv', 'rb'), encoding='cp1252', terminator=10, delimiter=44, fn_tranform=fn)
> next(reader)
> [2,3,4]
> next(reader)
> [11,21,31]

Chain Transformations

# !cat file.csv
# 1,2,3
# 10,20,30
# 100,200,300

> fn_1 = lambda x: x+1
> fn_2 = lambda x: x*10
> reader = AlphaReader(open('/raw/tsv/file.tsv', 'rb'), encoding='cp1252', terminator=10, delimiter=44, fn_tranform=[fn_1, fn_2])
> next(reader)
> [20,30,40]
> next(reader)
> [110,210,310]

Caution with large files

> reader = AlphaReader(open('large_file.xsv', 'rb'), encoding='cp1252', terminator=172, delimiter=173)
> records = list(reader) # Avoid this as it will load all file in memory