Command line utilities for running workflows

Project description

altocumulus

Command line utilities for running workflows on Terra including:

Add/update methods in Terra.
Generate a Terra WDL input.json stub.
Run a Terra method. Replace local file paths with workspace Google Cloud bucket URLs. Automatically upload referenced files to workspace Google bucket.
Bulk add/delete methods in Terra.
Parse monitoring log files to determine optimal instance type and disk space.

git clone https://github.com/klarman-cell-observatory/altocumulus.git
cd altocumulus
pip install -e .

This version

1.0.0

Mar 2, 2020

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