Command line utilities for running workflows
Project description
altocumulus
Command line utilities for running workflows on Terra including:
- Add/update methods in Terra.
- Generate a Terra WDL input.json stub.
- Run a Terra method. Replace local file paths with workspace Google Cloud bucket URLs. Automatically upload referenced files to workspace Google bucket.
- Bulk add/delete methods in Terra.
- Parse monitoring log files to determine optimal instance type and disk space.
Installation
git clone https://github.com/klarman-cell-observatory/altocumulus.git
cd altocumulus
pip install -e .
Usage
- Type
altofor a list of all commands.
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