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Python library for ANA f0 file I/O

Project description

ANA.IO - A Python module for ANA f0 file I/O

This is anaio, a Python module to perform file input and output operations with the ANA f0 file format, originally developed by Robert Shine. This module is mostly a wrapper around the slightly modified code of the IDL DLM library by Michiel van Noort. This library in turn borrows code from the old ANA routines.

This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

Installation

The easiest and recommended way is to install via pip:

$ pip install anaio

This module can be installed using the standard NumPy distutils. Therefore, simply running

python setup.py install

will install this module to the default installation location. Running

python setup.py

will start an interactive installation process.

Usage

Import it as usual

import anaio

To read a file:

anadata = anaio.fzread(filename)

which will return a dict with the data in anadata['data'] and some meta info in anadata['header'].

To return only either the data or header, use anaio.getdata() or anaio.getheader() respectively. The letter will also not read the data and therefore speed up the process if you are interested in the header only.

To write a file:

anaio.fzwrite(filename, data):

or use anaio.writeto(), which is an alias to fzwrite().

Version history

20230301, v1.0.0:

  • Renamed to anaio to prepare publishing on pipy

20220926, v0.5.0:

  • Forked from Tim van Werkhoven's PyANA v0.4.3
  • Added support to read ana headers without the data.
  • Added more test cases.

20090422, v0.4.0:

  • Fixed dimension problem, ANA and numpy expect dimensions in different order

20090422, v0.3.3:

  • Made errors a little nicer to read & more understandable.
  • Added pyana.writeto() wrapper for fzwrite, similar to pyfits.

20090331, v0.3.2:

  • Updated segfault fix in anadecrunch(). Illegal read beyond memory allocation can be as much as 4 bytes in the worst case in 32-bit decrunching (although this is rarely used).

20090327, v0.3.1:

  • Fixed a segfault error in anadecrunch(). Problem was pre-caching of a few bytes of compressed data, however the malloc() used for the compressed data did not have those few bytes extra, causing a 1 or 2 byte illegal read. Normally this shouldn't be a problem, but sometimes (like when I needed it) it is.

20090326, v0.3.0:

  • Old code had memory leaks, trying Michiel van Noort's improved code from libf0, the IDL DLM library. Hopefully this works better.
  • Renamed functions to correspond with the (original) IDL functions. load() -> fzread() and save() -> fzwrite(). Parameters still the same.

20090218, v0.2.2:

  • Added file exists check before calling _pyana.load C-routine

Contributions

Based on Tim van Werkhoven's original PyANA implementation. A wrapper around Michiel van Noort's ANACompress library.

Currently maintained by J. Hölken

License

MIT

Repository / Code / Issuetracker:

https://gitlab.gwdg.de/hoelken/pyana

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