Performs validity check of ancientMetagenomeDir datasets

Project description

AncientMetagenomeDirCheck

A python package to check AncientMetagenomeDir.

AncientMetagenomeDirCheck will verify a dataset, in tabular format, against a json schema.

Install

From PyPI using pip

pip install ancientMetagenomeDirCheck

The latest development version, directly from GitHub

pip install --upgrade --force-reinstall git+https://github.com/SPAAM-workshop/AncientMetagenomeDirCheck.git

Documentation

$ ancientMetagenomeDirCheck --help
Usage: ancientMetagenomeDirCheck [OPTIONS] DATASET SCHEMA

  ancientMetagenomeDirCheck: Performs validity check of ancientMetagenomeDir datasets
  Author: Maxime Borry
  Contact: <borry[at]shh.mpg.de>
  Homepage & Documentation: github.com/maxibor/ancientMetagenomeDirCheck

  DATASET: path to tsv file of dataset to check
  SCHEMA: path to JSON schema file

Options:
  --version  Show the version and exit.
  --help     Show this message and exit.

Project details

Release history Release notifications | RSS feed

1.3

Nov 5, 2021

1.2.1

Jan 18, 2021

1.2

Sep 3, 2020

This version

1.1

Sep 2, 2020

1.1.dev0 pre-release

Sep 2, 2020

1.0

Aug 27, 2020

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

ancientMetagenomeDirCheck-1.1.tar.gz (3.6 kB view details)

Uploaded Sep 2, 2020 Source

Built Distribution

ancientMetagenomeDirCheck-1.1-py3-none-any.whl (17.2 kB view details)

Uploaded Sep 2, 2020 Python 3

File details

Details for the file ancientMetagenomeDirCheck-1.1.tar.gz.

File metadata

Download URL: ancientMetagenomeDirCheck-1.1.tar.gz
Upload date: Sep 2, 2020
Size: 3.6 kB
Tags: Source
Uploaded using Trusted Publishing? No
Uploaded via: twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.3.1 requests-toolbelt/0.9.1 tqdm/4.48.2 CPython/3.8.5

File hashes

Hashes for ancientMetagenomeDirCheck-1.1.tar.gz
Algorithm	Hash digest
SHA256	`63c0ad21d5a42c083af7ba6888a4e11aa51399a7469b679d0b87632cb305f66d`
MD5	`70e732e7a19ee2f9d1d4711d79abced5`
BLAKE2b-256	`492390e26ee80bf5ccb26e11dceca0a3b41ac197210ca3a55bcd1a7a2f7de814`

See more details on using hashes here.

File details

Details for the file ancientMetagenomeDirCheck-1.1-py3-none-any.whl.

File metadata

Download URL: ancientMetagenomeDirCheck-1.1-py3-none-any.whl
Upload date: Sep 2, 2020
Size: 17.2 kB
Tags: Python 3
Uploaded using Trusted Publishing? No
Uploaded via: twine/3.2.0 pkginfo/1.5.0.1 requests/2.24.0 setuptools/49.3.1 requests-toolbelt/0.9.1 tqdm/4.48.2 CPython/3.8.5

File hashes

Hashes for ancientMetagenomeDirCheck-1.1-py3-none-any.whl
Algorithm	Hash digest
SHA256	`15548d2969e4b555a64f2f586dae1dd4d76e29761aa3f436c9bef68aa8542bd4`
MD5	`1da7a105417f679c2367e9e88b6d5495`
BLAKE2b-256	`be244d82c7874ede53356fc2c66f6407efb99f16bb8dcac137280ad216de7ca3`