Skip to main content

AnnoFetch is a command line script that fetches biological annotations for valid database accessions. Called with a file containing valid gene or protein accessions it produces a csv-file containing available annotations for each accession. Therefore AnnoFetch fetches entries from several databases like Genbank (NCBI), Ena (EMBL) or UniProtKB and extracts the desired annotations.

A short Tutorial is given in the README.md file within the Example folder.

Release files for annofetch 1.0.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for annofetch 1.0.0
File Size Uploaded
annofetch-1.0.0.tar.gz 29.7 kB Details

Built distribution (wheel)

Table of built distributions (wheels) for annofetch 1.0.0
File Interpreter ABI Platform
annofetch-1.0.0-py3-none-any.whl Python 3 none any Details

Total release size: 78.3 kB

Release files / annofetch-1.0.0.tar.gz

Download URL annofetch-1.0.0.tar.gz
Size 29.7 kB
Tags Source
SHA-256 checksum
How to use checksums
b926f592525ceaf95edc411247f6079a7bf0de831fda0e10ce80bf532eb67b4f
BLAKE2b-256 checksum
How to use checksums
2e57b860eaaf47bd9190b4fcc2f9df3c0651dccebf584a88706910bfe138d01d
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via twine/2.0.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.0.1 requests-toolbelt/0.9.1 tqdm/4.32.1 CPython/3.7.3

Release files / annofetch-1.0.0-py3-none-any.whl

Download URL annofetch-1.0.0-py3-none-any.whl
Size 48.5 kB
Tags Python 3
SHA-256 checksum
How to use checksums
7e12cdc25aba79ae28cf714bd40cee5b2021b71b8b8d04d53073a296463b4f9a
BLAKE2b-256 checksum
How to use checksums
5b65270486ae20a19d2902cac3f6694c5cb386c9d595ad1c01e26a44f6e97f63
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
No
Uploaded via twine/2.0.0 pkginfo/1.5.0.1 requests/2.22.0 setuptools/41.0.1 requests-toolbelt/0.9.1 tqdm/4.32.1 CPython/3.7.3

Release history Release notifications | RSS feed

This release

1.0.0 This release

2 release files

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page