Skip to main content

Toolbox for the analysis of smFISH images.

Project description

api-FISH

Installation

Dependencies

apiFISH requires Python XXX or newer. Additionally, it has the following dependencies:

  • numpy (>= 1.16.0)

  • scipy (>= 1.4.1)

  • scikit-learn (>= 0.21.0)

  • scikit-image (>= 0.14.2)

  • matplotlib (>= 3.0.2)

  • pandas (>= 0.24.0)

  • mrc (>= 0.1.5)

  • tensorflow (== 2.3.0)

  • tensorflow-addons (== 0.12.1)

Virtual environment

Usage

Support

Roadmap (suggestion)

Development

Source code

Contributing

Testing

Citation

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

apifish-0.6.2a1.tar.gz (126.3 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

apifish-0.6.2a1-py3-none-any.whl (144.3 kB view details)

Uploaded Python 3

File details

Details for the file apifish-0.6.2a1.tar.gz.

File metadata

  • Download URL: apifish-0.6.2a1.tar.gz
  • Upload date:
  • Size: 126.3 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.1 CPython/3.7.6

File hashes

Hashes for apifish-0.6.2a1.tar.gz
Algorithm Hash digest
SHA256 05e1b4d76d60ac7681cd33bc998009ed4c6bbc6108e2796e14a3f53ff84a06f7
MD5 f108adff356e2bf27d828600d24c75a8
BLAKE2b-256 c072343ecd4e965b18887c1a3fa60dc456646feaf0f857d00b2e1e378ba12584

See more details on using hashes here.

File details

Details for the file apifish-0.6.2a1-py3-none-any.whl.

File metadata

  • Download URL: apifish-0.6.2a1-py3-none-any.whl
  • Upload date:
  • Size: 144.3 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/4.0.1 CPython/3.7.6

File hashes

Hashes for apifish-0.6.2a1-py3-none-any.whl
Algorithm Hash digest
SHA256 2eb88f49896cb546ce67acb926b0cb8b549ccf5ff7d185a6fc25ed78f1d3ce1e
MD5 79f39c3eeacf1680795fa37338a6927e
BLAKE2b-256 bc6f3701b48ac768cb139dff36ca5aca4b6b683851439fde01627a30ce0bf46b

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page