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Chemical drawing with Python

Project description

applique

Downloads License: GPL v3 Python Versions Code style: black PyPI - Version

applique is a simple program that can write xyz file from .mol files. It really is just a missing puzzle piece in the quantum chemistry world, as some molecular editors went corrupt. Now one can use common Quantum Chemistry software again. It mimics Avogadros behaviour.

Nothing special.

Installation

Simple as always

pip install applique

Usage

So for example you load a molfile like this

mol_file_benzene = "tests/molecules/benzene.mol"
benzene = benzene.from_mol(mol_file_benzene)

Then write the .xyz like this

file_name_benzene = "./tests/molecules/benzene.xyz"
coordinates = self.benzene.struct3D() #you can omit if you don't want to preoptimize the structure.
write_xyz(self.benzene, file_name_benzene)

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