Read the data of an ODBC data source as sequence of Apache Arrow record batches.
Project description
arrow-odbc-py
Fill Apache Arrow arrays from ODBC data sources. This crate is build on top of the pyarrow
Python package and arrow-odbc
Rust crate and enables you to read the data of an ODBC data source as sequence of Apache Arrow record batches.
This package can also be used to insert data in Arrow record batches to database tables.
This package has been designed to be easily deployable, so it provides a prebuild many linux wheel which is independent of the specific version of your Python interpreter and the specific Arrow Version you want to use. It will dynamically link against the ODBC driver manager provided by your system.
Users looking for more features than just bulk fetching/inserting data from/into ODBC data sources in Python should also take a look at turbodbc
which has a helpful community and seen a lot of battle testing. This Python package is more narrow in Scope (which is a fancy way of saying it has less features), as it is only concerned with bulk fetching Arrow Arrays. turbodbc
may be harder to install using pip
though, due to it's reliance on C++ API and external dependencies like boost
.
About Arrow
Apache Arrow defines a language-independent columnar memory format for flat and hierarchical data, organized for efficient analytic operations on modern hardware like CPUs and GPUs. The Arrow memory format also supports zero-copy reads for lightning-fast data access without serialization overhead.
About ODBC
ODBC (Open DataBase Connectivity) is a standard which enables you to access data from a wide variaty of data sources using SQL.
Usage
Query
from arrow_odbc import read_arrow_batches_from_odbc
connection_string="Driver={ODBC Driver 17 for SQL Server};Server=localhost;"
reader = read_arrow_batches_from_odbc(
query=f"SELECT * FROM MyTable WHERE a=?",
connection_string=connection_string,
batch_size=1000,
parameters=["I'm a positional query parameter"],
user="SA",
password="My@Test@Password",
)
for batch in reader:
# Process arrow batches
df = batch.to_pandas()
# ...
Insert
from arrow_odbc import insert_into_table
# Arrow Field name must match column name of database table.
schema = pa.schema([("a", pa.int64())])
def iter_record_batches():
for i in range(2):
yield pa.RecordBatch.from_arrays([pa.array([1, 2, 3])], schema=schema)
# Reader must be ablet to iterate over record batches, exposing a `schema` attribute.
# RecordBatchReader implements this protocol.
reader = pa.RecordBatchReader.from_batches(schema, iter_record_batches())
insert_into_table(
connection_string="Driver={ODBC Driver 17 for SQL Server};Server=localhost;",
user="SA",
password="My@Test@Password",
chunk_size=1000,
table="MyTable",
reader=reader,
)
Installation
Installing ODBC driver manager
The provided wheels dynamically link against the driver manager, which must be provided by the system.
Windows
Nothing to do. ODBC driver manager is preinstalled.
Ubuntu
sudo apt-get install unixodbc-dev
OS-X
You can use homebrew to install UnixODBC
brew install unixodbc
Installing Rust toolchain
Note: Only required if building from source
To build from source you need to install the Rust toolchain. Installation instruction can be found here: https://www.rust-lang.org/tools/install
Installing the wheel
Wheels have been uploaded to PyPi and can be installed using pip. The wheel (including the manylinux wheel) will link against the your system ODBC driver manager at runtime. If there are no prebuild wheels for your platform, you can build the wheel from source. For this the rust toolchain must be installed.
pip install arrow-odbc
arrow-odbc
utilizes cffi
and the Arrow C-Interface to glue Rust and Python code together. Therefore the wheel does not need to be build against the precise version either of Python or Arrow.
Matching of ODBC to Arrow types then querying
ODBC | Arrow |
---|---|
Numeric(p <= 38) | Decimal |
Decimal(p <= 38) | Decimal |
Integer | Int32 |
SmallInt | Int16 |
Real | Float32 |
Float(p <=24) | Float32 |
Double | Float64 |
Float(p > 24) | Float64 |
Date | Date32 |
LongVarbinary | Binary |
Timestamp(p = 0) | TimestampSecond |
Timestamp(p: 1..3) | TimestampMilliSecond |
Timestamp(p: 4..6) | TimestampMicroSecond |
Timestamp(p >= 7 ) | TimestampNanoSecond |
BigInt | Int64 |
TinyInt | Int8 |
Bit | Boolean |
Varbinary | Binary |
Binary | FixedSizedBinary |
All others | Utf8 |
Matching of Arrow to ODBC types then inserting
Arrow | ODBC |
---|---|
Utf8 | VarChar |
Decimal(p, s = 0) | VarChar(p + 1) |
Decimal(p, s != 0) | VarChar(p + 2) |
Int8 | TinyInt |
Int16 | SmallInt |
Int32 | Integer |
Int64 | BigInt |
Float16 | Real |
Float32 | Real |
Float64 | Double |
Timestamp s | Timestamp(7) |
Timestamp ms | Timestamp(7) |
Timestamp us | Timestamp(7) |
Timestamp ns | Timestamp(7) |
Date32 | Date |
Date64 | Date |
Time32 s | Time |
Time32 ms | VarChar(12) |
Time64 us | VarChar(15) |
Time64 ns | VarChar(16) |
Binary | Varbinary |
FixedBinary(l) | Varbinary(l) |
All others | Unsupported |
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