A tools of bam to image
Project description
# BAM shot
该包用于对BAM文件画图,依赖samtools, python3.X, pyssam版本: 主要参数:
bam: BAM文件
ref: 参考基因组FASTA,需要提前使用samtools faidx构建索引
chrom: 染色体
start: 起始位置
end:终止位置
extend:两端拓展长度
……
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
bam_shot-0.0.1.tar.gz
(4.8 kB
view details)
Built Distribution
File details
Details for the file bam_shot-0.0.1.tar.gz
.
File metadata
- Download URL: bam_shot-0.0.1.tar.gz
- Upload date:
- Size: 4.8 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.7.0 importlib_metadata/4.8.2 pkginfo/1.8.1 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.9.7
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | 683127803c98dbaecf8169e9a22663950eee5f3e807064f2e1cab27100b546ce |
|
MD5 | b897ec933f216a63b338236c6ff5a21a |
|
BLAKE2b-256 | 42adda073d631403a0cdddf1c61b9f26b44a0acc828c89e9e91251dfd84daae6 |
File details
Details for the file bam_shot-0.0.1-py3-none-any.whl
.
File metadata
- Download URL: bam_shot-0.0.1-py3-none-any.whl
- Upload date:
- Size: 4.7 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.7.0 importlib_metadata/4.8.2 pkginfo/1.8.1 requests/2.26.0 requests-toolbelt/0.9.1 tqdm/4.62.3 CPython/3.9.7
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 | 826f191ef01fb7da708a3f5c362ccbe9d9bd844ba2a20e111f0edc699f488f58 |
|
MD5 | 3a3981db4224d26a79c06a13380dd1bf |
|
BLAKE2b-256 | c30655a6d23b89df10ba5f5d62595fce8a813f71db988400d741587a9d3542f6 |