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A tools of bam to image

Project description

# BAM shot

该包用于对BAM文件画图,依赖samtools, python3.X, pyssam版本: 主要参数:

  • bam: BAM文件

  • ref: 参考基因组FASTA,需要提前使用samtools faidx构建索引

  • chrom: 染色体

  • start: 起始位置

  • end:终止位置

  • extend:两端拓展长度

  • ……

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