Pure Python, OS-agnostic Binary Alignment Map (BAM) random access and parsing tool
a pure Python, OS-agnositic Binary Alignment Map (BAM) file parser and random access tool.
There are 4 methods of installation available (choose one):
Through the conda package manager (Anaconda Cloud)
# first, add the conda-forge channel to your conda build conda config --add channels conda-forge # now bamnostic is available for install conda install bamnostic
Through the Python Package Index (PyPI)
pip install bamnostic # or, if you don't have superuser access pip install --user bamnostic
# again, use --user if you don't have superuser access pip install -e git+https://github.com/betteridiot/bamnostic.git#egg=bamnostic # or, if you don't have superuser access pip install --user -e git+https://github.com/betteridiot/bamnostic.git#bamnostic#egg=bamnostic
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