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Pipeline for Running SNV analysis

Project description

# baseqSNV

This package wraps GATK4 and Mutect2 for predicting SNVs from genomic sequencing data.

## Install baseqSNV We need python3 and a package called: baseq_drops, which could be installed by:

pip install baseqSNV

After install, you will have a runnable command baseqSNV

For more detailed tutorial and information, please visit http://wgs.beiseq.cn/document_snv/index.html.

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