bayes_traj
Project description
bayes_traj
Algorithms and tools for Bayesian trajectory modeling
pip install provenance_tools
pip install bayes_traj
Overview of code
mult_dp_regression.py
is the current non-pyro model "multivariate Dirichlet process regression"generate_prior.py
creates a prior file.viz_data_prior_draws.py
prior predictive checks.bayes_traj_main.py --out_model PICKLE_FILE
saves a trajectory model configured by other tools. This inputs a prior file.viz_model_trajs.py
is posterior predictive check, visualizes the learned clusters.sumarize_traj_model.py
prints additional info.assign_trajectory.py
reads in the model + data.csv and outputs a data.csv file with one appended column that is the assigned trajectory.
Other files are legacy.
Running tests
pytest
or when debugging
pytest -vsx --pdb
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bayes_traj-1.0.0.tar.gz
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