Package: bbcu.reportIlluminaInterop
The package creates file with statistics of sequencing run (HiSeq or NextSeq machines of illumina).
The run command is:
run-sav-stat.py –input-folder INPUT_FOLDER –output-file OUTPUT_FILE
INPUT_FOLDER - Run folder of the machine. Need to looked like this: 180717_NB551168_0163_AHF727BGX7 OUPUT_FILE - Your name for the output file (with .txt extension).
Example of output files are under “examples” folder.
You can convert it to pdf with the commnad:
pandoc -o OUTPUT_FILE.pdf –variable=geometry:landscape OUTPUT_FILE
Developed by Refael Kohen (refael.kohen@gmail.com)
Bioinformatics unit at Life Sciences Core Facilities (LSCF),
Weizmann Institute of Science
Based on the Python package interop.
2 maintainers
Release files for bbcu.reportIlluminaInterop 1.0.3
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
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| bbcu.reportIlluminaInterop-1.0.3.tar.gz | 4.8 kB | Details |
Release files / bbcu.reportIlluminaInterop-1.0.3.tar.gz
| Download URL | bbcu.reportIlluminaInterop-1.0.3.tar.gz |
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| Size | 4.8 kB |
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