Project description

Detection of LED head stage based on MTT files, used by the BBO lab at caesar research center

Installation

Windows

Install Anaconda
Clone git@github.com:bbo-lab/multitrackpy.git
Open Anaconda prompt via Start Menu
Using cd and dir, navigate to the multitrackpy folder INSIDE the repository (which may also be named multitrackpy)
Create conda environment using conda env create -f environment.yml
Switch to multitrackpy environment: conda activate multitrackpy
Add multitrackpy module to conda environment: conda develop [path to your repository, including repository folder]

You can now run the program with python -m multitrackpy -h:

usage: __main__.py [-h] --mtt_file MTT_FILE --video_dir VIDEO_DIR
                   [--linedist_thres LINEDIST_THRES] [--corr_thres CORR_THRES]
                   [--led_thres LED_THRES] [--n_cpu N_CPU]
                   START_IDX END_IDX
__main__.py: error: the following arguments are required: START_IDX, END_IDX, --mtt_file, --video_dir

Project details

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Project links

Homepage

Release history Release notifications | RSS feed

1.1.6

Jan 16, 2024

1.1.5

Jan 25, 2023

1.1.4

Dec 7, 2022

1.1.3

Nov 24, 2022

1.1.2

Sep 14, 2022

1.1.1

Aug 31, 2022

This version

1.1.0

May 13, 2022

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