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BarcelonaBeta + XNAT = bx

Project description

bx

pipeline status coverage report downloads python versions pypi version

BarcelonaBeta + XNAT = BX

Usage

bx <command> <subcommand> <resource_id> --config /path/to/.xnat.cfg --dest /tmp [--overwrite]

Examples:

bx spm12 volumes <resource_id>
bx spm12 files <resource_id>
bx spm12 report <resource_id>
bx spm12 tests <resource_id>
bx freesurfer6 aseg <resource_id>
bx freesurfer6 aparc <resource_id>
bx freesurfer6 hippoSfVolumes <resource_id>
bx freesurfer6 files <resource_id>
bx mrdates <resource_id>

Dependencies

Requires the bbrc branch of pyxnat.

Install

pip install bbrc-bx

Development

Please contact us for details on how to contribute.

BarcelonaBeta

Project details


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