exome coverage calculation
Project description
This package has a set of modules to get coverage statistics for targeted DNA sequencing.
Main modules:
# Installation
if you already have a bcbio installation working:
git clone https://github.com/lpantano/bcbio.coverage.git
export PYTHONPATH=$PATH_to_clone_
# Usage make sure to use the bcbio python:
python /$PATH_to_clone/scripts/coverage.py
You can do an exec and add it to your path modifying the file scripts/coverage
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