bconv 0.1

Convert between BioNLP formats

# bconv: Python library for converting between BioNLP formats

## Supported formats

The following formats are currently supported:

• bioc_xml, bioc_json: BioC

• bionlp: BioNLP stand-off (output only)

• brat: brat stand-off (output only)

• conll: CoNLL

• europepmc, europepmc.zip: Europe-PMC JSON (output only)

• pubtator:, pubtator_fbk: PubTator

• pubmed, pxml, pxml.gz: PubMed abstracts (input only)

• pmc, nxml: PMC full-text (input only)

• pubanno_json: PubAnnotation JSON (output only)

• tsv, text_tsv: tab-separated values (output only)

• txt: plain text

• txt_json: collection of plain-text documents (input only)