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A simple package for consolidating BIDS formatted JSON data

Project description

JSON Phenos to Dict - Package

This pacakge is specific for BIDS formatted data with JSON files. Create a CSV or obtain a python dictionary for your desired subjects and phenotypes.

You can use this tool in the command line or in a python session. If you specifically want a dictionary, import that package and invoke 'main' in a python session. You will be prompted for arguments: desired phenotypes, the filepath 'base' for your JSON files, and the name of the (optional) output csv.

For help, enter 'python consolidate_json_phenos.py -h' in the command line for the list of options.

More can be found here: Marco-Nardin-GitHub

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