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Downloader, parser, and BEL converter for FamPlex

Project description

Protein complex and family hierarchies from FamPlex.

Installation Current version on PyPI Stable Supported Python Versions MIT License

bio2bel_famplex can be installed easily from PyPI with the following code in your favorite terminal:

$ python3 -m pip install bio2bel_famplex

or from the latest code on GitHub with:

$ python3 -m pip install git+https://github.com/bio2bel/famplex.git

Setup

FamPlex can be downloaded and populated from either the Python REPL or the automatically installed command line utility.

Python REPL

>>> import bio2bel_famplex
>>> famplex_manager = bio2bel_famplex.Manager()
>>> graph = famplex_manager.to_bel()

Project details


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  • Upload date:
  • Size: 7.9 kB
  • Tags: Python 3.6
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.4.2 requests/2.20.1 setuptools/40.6.2 requests-toolbelt/0.8.0 tqdm/4.28.1 CPython/3.7.0

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