Skip to main content

A framework for converting biological data sources to BEL

Project description

Bio2BEL is a project aimed at bringing biological databases and other structured knowledge sources in a wide variety of schemata into the unified framework of the Biological Expression Language [1].

Two important places to look:

Installation Current version on PyPI Stable Supported Python Versions MIT License

Download the latest stable code from PyPI with:

$ python -m pip install bio2bel

or get the latest from GitHub with:

$ git clone https://github.com/bio2bel/bio2bel.git
$ cd bio2bel
$ python -m pip install -e .

or check the installation instructions.

Citation

If you find Bio2BEL useful for your work, please consider citing:

[1]Hoyt, C. T., et al. (2019). Integration of Structured Biological Data Sources using Biological Expression Language. bioRxiv, 631812.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for bio2bel, version 0.4.1
Filename, size File type Python version Upload date Hashes
Filename, size bio2bel-0.4.1-py3-none-any.whl (73.6 kB) File type Wheel Python version py3 Upload date Hashes View
Filename, size bio2bel-0.4.1.tar.gz (71.2 kB) File type Source Python version None Upload date Hashes View

Supported by

AWS AWS Cloud computing Datadog Datadog Monitoring DigiCert DigiCert EV certificate Facebook / Instagram Facebook / Instagram PSF Sponsor Fastly Fastly CDN Google Google Object Storage and Download Analytics Pingdom Pingdom Monitoring Salesforce Salesforce PSF Sponsor Sentry Sentry Error logging StatusPage StatusPage Status page