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A framework for converting biological data sources to BEL

Project description

Bio2BEL is a project aimed at bringing biological databases and other structured knowledge sources in a wide variety of schemata into the unified framework of the Biological Expression Language [1].

Two important places to look:

Installation Current version on PyPI Stable Supported Python Versions MIT License

Download the latest stable code from PyPI with:

$ python -m pip install bio2bel

or get the latest from GitHub with:

$ git clone
$ cd bio2bel
$ python -m pip install -e .

or check the installation instructions.


If you find Bio2BEL useful for your work, please consider citing:

[1]Hoyt, C. T., et al. (2019). Integration of Structured Biological Data Sources using Biological Expression Language. bioRxiv, 631812.

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