Bioinformatic toolkit with python (It's still under development!)
Project description
BioinformaticAnalysisTools
about author
author: 赵华男 | ZHAO Hua-nan
email: hermanzhaozzzz@gmail.com
Introduction
A python package & command line toolkit for Bioinformatics and data science!
<under development>!!
Installation
# supported platform: Linux / MacOS (intel & arm64) / WSL on Windows
pip install --upgrade bioat
usage
# list commands
bioat list
# check version
bioat version
# check information about bioat
bioat about
# example usage
bioat bam remove_clip --help
samtools view -h test_sorted_n.bam | bioat bam remove_clip | tail
known trouble
- sometimes, pysam dependent foo.lib can be absent, just
brew install foo.libto fix it.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
bioat-0.2.8.tar.gz
(109.2 kB
view hashes)
Built Distribution
bioat-0.2.8-py3-none-any.whl
(114.5 kB
view hashes)
