Biobricks automates bioinformatics data.
Project description
BioBricks
BioBricks makes loading data from biological datasets easy.
pip install biobricks
initialize
To get started configure biobricks with a path for bricks and a biobricks.ai token:
biobricks configure
> Choose path to store bricks: <input a local path>
> Input a token from biobricks.ai/token: <this is your access token>
Install and Use Bricks
To install a brick the command line command:
> biobricks install tox21
You can then use the brick in python as below:
import biobricks as bb
bb.assets('tox21') # get the paths for the 'tox21' brick
To list the bricks currently available visit github.com/biobricks-ai
TODO
- eventually need to special case (or remove) the testing biobricks token
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
biobricks-0.3.0.tar.gz
(14.1 kB
view hashes)
Built Distribution
biobricks-0.3.0-py3-none-any.whl
(12.0 kB
view hashes)
Close
Hashes for biobricks-0.3.0-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 263a2ba5feaa4ea837db2a87f9821428884e87d69cc95020a6c2a079e2701933 |
|
MD5 | 3bb5367675df3d319a3328517fb4b846 |
|
BLAKE2b-256 | bb39d778d1dd5be5cb3f8f775d5bd2e4fada78f28f83c3656e28a2f260d1d55b |