convert between bioinformatics formats
Project description
Bioinformatics tools in Python
- note:
Bioconvert is tested with Travis for the following Python version: 3.5 and 3.6. Python 2 won’t be provided.
- contributions:
Please join https://github.com/biokit/bioconvert
- issues:
Please use https://github.com/biokit/bioconvert/issues
Installation
In order to install bioconvert, you can use pip:
pip install bioconvert
Usage
convert input.fastq output.fasta convert input.fq output.fasta convert input.mybam output.bed --input-format bam convert --formats convert --help
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
bioconvert-0.0.3.tar.gz
(123.4 kB
view details)
File details
Details for the file bioconvert-0.0.3.tar.gz.
File metadata
- Download URL: bioconvert-0.0.3.tar.gz
- Upload date:
- Size: 123.4 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
2a9eedd7a2b27d83196d3235565baf166abf2175adfc879e752d75a9190af7cf
|
|
| MD5 |
4806f8bbe1e2caba48a081066b58a223
|
|
| BLAKE2b-256 |
d5ed0953b534e20c21c51718cd161d60a1b320ea66f02977ce9916fc9ef3723f
|
